Publications

2017
19. Genomics of introgression in the Chinese horseshoe bat (Rhinolophus sinicus) revealed by transcriptome sequencing. X Mao, G Tsagkogeorga, SE Bailey, SJ Rossiter (2017). Biol J Lin Soc blx017. doi: 10.1093/biolinnean/blx017 [LINK] [PDF]

18. Comparative genomics reveals contraction in olfactory receptor genes in bats. G Tsagkogeorga, S  Müller, C Dessimoz, SJ Rossiter (2017). Sci Rep, 7(1): 259 [LINK] [PDF]

2016
17.  The use of museum samples for large-scale sequence capture: a study of congeneric horseshoe bats (family Rhinolophidae). SE Bailey, X Mao, M Struebig, G Tsagkogeorga, G Csorba, LR Heaney, J Sedlock, W Stanley, JM Rouillard, SJ Rossiter (2016). Biol J Lin Soc, 117(1): 58 [LINK] [PDF]

2015
16.  A phylogenomic analysis of the role and timing of molecular adaptation in the aquatic transition of cetartiodactyl mammals. G Tsagkogeorga, MR McGowen, KTJ Davies, S Jarman, A Polanowski, MF Bertelsen, SJ Rossiter (2015). R Soc Open Sci, 2(9): 150156 [LINK] [PDF]

15.  Family wide molecular adaptations to underground life in african mole-rats revealed by phylogenomic analysis. KTJ Davies, NC Bennett, G Tsagkogeorga, SJ Rossiter, CG Faulkes (2015). MBE, 32(12): 3089 [LINK] [PDF]

2014
14.  Divergent evolutionary rates in vertebrate and mammalian specific conserved non-coding elements (CNEs) in echolocating mammals. KTJ Davies, G Tsagkogeorga, SJ Rossiter (2014). BMC Evol Biol, 14(1): 261 [LINK] [PDF]

13.  Molecular evolution of growth hormone and insulin-like growth factor 1 receptors in long-lived, small-bodied mammals. KTJ Davies, G Tsagkogeorga, NC Bennett, LM Davalos, CG Faulkes, SJ Rossiter (2014). Gene, 549(2): 228 [LINK] [PDF]

12.  Comparative population genomics in animals uncovers the determinants of genetic diversity. J Romiguier, P Gayral, M Ballenghien, A Bernard, V Cahais, A Chenuil, Y Chiari, R Dernat, L Duret, N Faivre, E Loire, JM Lourenco, B Nabholz, C Roux, G Tsagkogeorga, AA Weber, LA Weinert, K Belkhir, N Bierne, S Glemin, N Galtier (2014). Nature, 515(7526): 261 [LINK] [PDF]

2013
CurrBiol_Cover11.  Phylogenomic analyses elucidate the evolutionary relationships of bats. G Tsagkogeorga*, J Parker*, JA Cotton, E Stupka, SJ Rossiter (2013). Curr Biol, 23(22): 2262 [LINK] [PDF]

10.  Genome-wide signatures of convergent evolution in echolocating mammals. J Parker*, G Tsagkogeorga*, JA Cotton, Y Liu, P Provero, E Stupka, SJ Rossiter (2013). Nature, 502(7470): 228 [LINK] [PDF]

9.  Crossing the species barrier: genomic hotspots of introgression between two highly divergent Ciona intestinalis species. C Roux, G Tsagkogeorga, N Bierne, N Galtier (2013). MBE, 30(7): 1574 [LINK] [PDF]

2012
8.  The population genomics of a fast evolver: high levels of diversity, functional constraint and molecular adaptation in the tunicate Ciona intestinalis. G Tsagkogeorga, V Cahais, N Galtier (2012). GBE, 4(8): 852 [LINK] [PDF]

7.  Reference-free transcriptome assembly in non-model animals from next-generation sequencing data. V Cahais, P Gayral, G Tsagkogeorga, J Melo-Ferreira, M Ballenghien, LA Weinert, Y Chiari, K Belkhir, V Ranwez, N Galtier (2012). Mol Ecol Res, 12(5): 834 [LINK] [PDF]

2011
6.  Next-generation sequencing of transcriptomes: a guide to RNA isolation in nonmodel animals. P Gayral, L Weinert, Y Chiari, G Tsagkogeorga, M Ballenghien, N Galtier (2011). Mol Ecol Res, 11(4): 650 [LINK] [PDF]

2010
5.  Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate. F Denoeud, S Henriet, S Mungpakdee, JM Aury, CD Silva, H Brinkmann, J Mikhaleva, LC Olsen, C Jubin, C Canestro, JM Bouquet, G Danks, J Poulain, C Campsteijn, M Adamski, I Cross, F Yadetie, M Muffato, A Louis, S Butcher, G Tsagkogeorga, A Konrad, S Singh, MF Jensen, EH Cong, H Eikeseth-Otteraa, B Noel, V Anthouard, BM Porcel, R Kachouri-Lafond, A Nishino, M Ugolini, P Chourrout, H Nishida, R Aasland, S Huzurbazar, E Westhof, F Delsuc, H Lehrach, R Reinhardt, J Weissenbach, SW Roy, F Artiguenave, JH Postlethwait, JR Manak, EM Thompson, O Jaillon, LD Pasquier, R Boudinot, DA Liberles, JN Volff, H Philippe, B Lenhard, HR Crollius, P Wincker, D Chourrout (2010). Science, 330(6009): 1381 [LINK] [PDF]

4.  Accelerated evolutionary rate of housekeeping genes in tunicates. G Tsagkogeorga, X Turon, N Galtier, EJP Douzery, F Delsuc (2010). J Mol Evol, 71(2): 153 [LINK] [PDF]

2009
3.  Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny. TR Singh†, G Tsagkogeorga†, F Delsuc, S Blanquart, N Shenkar, Y Loya, EJP Douzery, D Huchon (2009). BMC Genom, 10: 534 [LINK] [PDF]

2.  An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models. G Tsagkogeorga, X Turon, RR Hopcroft, MK Tilak, T Feldstein, N Shenkar, Y Loya, D Huchon, EJP Douzery, F Delsuc (2009). BMC Evol Biol, 9: 187 [LINK] [PDF]

Genesis_Cover2008
1.  Additional molecular support for the new chordate phylogeny. F Delsuc, G Tsagkogeorga, N Lartillot, H Philippe (2008). Genesis, 46(11): 592 [LINK] [PDF]

*Joint first authors, †Equal contributors

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